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Cluster: HRGMv2_2009_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2009_12 HRGMv2_2009_12_2 933 1721 + 1.A.30.1.3
TC HRGMv2_2009_12 HRGMv2_2009_12_3 1718 2398 + 1.A.30.1.4
pfam HRGMv2_2009_12 HRGMv2_2009_12_4 2419 2994 + FliL
pfam HRGMv2_2009_12 HRGMv2_2009_12_5 3031 4077 + FliMN_C | FliM
TC HRGMv2_2009_12 HRGMv2_2009_12_6 4090 4581 + 3.A.6.2.1
pfam HRGMv2_2009_12 HRGMv2_2009_12_7 4640 4987 + DUF6812
CAZyme HRGMv2_2009_12 HRGMv2_2009_12_8 5089 5967 + GT9
Gene ID: HRGMv2_2009_12_2
Type: TC
Location: 933 - 1721 (+)
Gene ID: HRGMv2_2009_12_3
Type: TC
Location: 1718 - 2398 (+)
Gene ID: HRGMv2_2009_12_4
Type: pfam
Location: 2419 - 2994 (+)
Gene ID: HRGMv2_2009_12_5
Type: pfam
Location: 3031 - 4077 (+)
Gene ID: HRGMv2_2009_12_6
Type: TC
Location: 4090 - 4581 (+)
Gene ID: HRGMv2_2009_12_7
Type: pfam
Location: 4640 - 4987 (+)
Gene ID: HRGMv2_2009_12_8
Type: CAZyme
Location: 5089 - 5967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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