Cluster: HRGMv2_2006_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2006
- CGC Family ID: CGCFAM_05542
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2006_4 | HRGMv2_2006_4_12 | 9225 | 11291 | + | GH38 |
| NULL(UNKNOWN) | HRGMv2_2006_4 | HRGMv2_2006_4_13 | 11385 | 11630 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2006_4 | HRGMv2_2006_4_14 | 11732 | 13141 | - | 1.B.17.2.5 |
| TC | HRGMv2_2006_4 | HRGMv2_2006_4_15 | 13134 | 16268 | - | 2.A.6.2.16 |
| TC | HRGMv2_2006_4 | HRGMv2_2006_4_16 | 16288 | 17472 | - | 8.A.1.6.1 |
Gene ID: HRGMv2_2006_4_12
Type: CAZyme
Location: 9225 - 11291 (+)
Type: CAZyme
Location: 9225 - 11291 (+)
Gene ID: HRGMv2_2006_4_13
Type:
Location: 11385 - 11630 (-)
Type:
Location: 11385 - 11630 (-)
Gene ID: HRGMv2_2006_4_14
Type: TC
Location: 11732 - 13141 (-)
Type: TC
Location: 11732 - 13141 (-)
Gene ID: HRGMv2_2006_4_15
Type: TC
Location: 13134 - 16268 (-)
Type: TC
Location: 13134 - 16268 (-)
Gene ID: HRGMv2_2006_4_16
Type: TC
Location: 16288 - 17472 (-)
Type: TC
Location: 16288 - 17472 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2006_4_13 | vegan > omnivore | 19.68834 | 0.00565 |
| HRGMv2_2006_4_13 | vegetarian > omnivore | 20.75277 | 0.01332 |