Cluster: HRGMv2_2006_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2006
- CGC Family ID: CGCFAM_01601
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2006_15 | HRGMv2_2006_15_16 | 11799 | 13346 | + | 2.A.1.3.36 |
| NULL(UNKNOWN) | HRGMv2_2006_15 | HRGMv2_2006_15_17 | 13454 | 15700 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2006_15 | HRGMv2_2006_15_18 | 15857 | 17539 | - | 4.C.1.1.4 |
| CAZyme | HRGMv2_2006_15 | HRGMv2_2006_15_19 | 17738 | 19690 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_2006_15 | HRGMv2_2006_15_20 | 19738 | 20037 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_2006_15 | HRGMv2_2006_15_21 | 20179 | 20640 | + | MarR |
| TC | HRGMv2_2006_15 | HRGMv2_2006_15_22 | 20659 | 22221 | + | 2.A.1.3.36 |
Gene ID: HRGMv2_2006_15_16
Type: TC
Location: 11799 - 13346 (+)
Type: TC
Location: 11799 - 13346 (+)
Gene ID: HRGMv2_2006_15_17
Type:
Location: 13454 - 15700 (+)
Type:
Location: 13454 - 15700 (+)
Gene ID: HRGMv2_2006_15_18
Type: TC
Location: 15857 - 17539 (-)
Type: TC
Location: 15857 - 17539 (-)
Gene ID: HRGMv2_2006_15_19
Type: CAZyme
Location: 17738 - 19690 (+)
Type: CAZyme
Location: 17738 - 19690 (+)
Gene ID: HRGMv2_2006_15_20
Type:
Location: 19738 - 20037 (-)
Type:
Location: 19738 - 20037 (-)
Gene ID: HRGMv2_2006_15_21
Type: TF
Location: 20179 - 20640 (+)
Type: TF
Location: 20179 - 20640 (+)
Gene ID: HRGMv2_2006_15_22
Type: TC
Location: 20659 - 22221 (+)
Type: TC
Location: 20659 - 22221 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.