Cluster: HRGMv2_2006_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2006
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2006_7 | HRGMv2_2006_7_82 | 82438 | 83412 | + | GH3 |
| NULL(UNKNOWN) | HRGMv2_2006_7 | HRGMv2_2006_7_83 | 83427 | 84029 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2006_7 | HRGMv2_2006_7_84 | 84091 | 85329 | + | Aminotran_1_2 |
| TC | HRGMv2_2006_7 | HRGMv2_2006_7_85 | 85422 | 86384 | + | 9.B.146.1.4 |
Gene ID: HRGMv2_2006_7_82
Type: CAZyme
Location: 82438 - 83412 (+)
Type: CAZyme
Location: 82438 - 83412 (+)
Gene ID: HRGMv2_2006_7_83
Type:
Location: 83427 - 84029 (+)
Type:
Location: 83427 - 84029 (+)
Gene ID: HRGMv2_2006_7_84
Type: STP
Location: 84091 - 85329 (+)
Type: STP
Location: 84091 - 85329 (+)
Gene ID: HRGMv2_2006_7_85
Type: TC
Location: 85422 - 86384 (+)
Type: TC
Location: 85422 - 86384 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Zag111
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2006_7_84 | vegan > omnivore | 20.61509 | 0.00565 |
| HRGMv2_2006_7_84 | vegetarian > omnivore | 20.04928 | 0.01332 |
| HRGMv2_2006_7_85 | vegan > omnivore | 17.34096 | 0.00565 |
| HRGMv2_2006_7_85 | vegetarian > omnivore | 19.45820 | 0.01332 |