Cluster: HRGMv2_2005_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2005
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2005_1 | HRGMv2_2005_1_398 | 411591 | 413156 | + | GT2 |
| pfam | HRGMv2_2005_1 | HRGMv2_2005_1_399 | 413110 | 414291 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_2005_1 | HRGMv2_2005_1_400 | 414281 | 415381 | - | GT28 |
| TC | HRGMv2_2005_1 | HRGMv2_2005_1_401 | 415381 | 416559 | - | 2.A.103.1.3 |
| pfam | HRGMv2_2005_1 | HRGMv2_2005_1_402 | 416531 | 417904 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_2005_1 | HRGMv2_2005_1_403 | 417906 | 418853 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_2005_1_398
Type: CAZyme
Location: 411591 - 413156 (+)
Type: CAZyme
Location: 411591 - 413156 (+)
Gene ID: HRGMv2_2005_1_399
Type: pfam
Location: 413110 - 414291 (-)
Type: pfam
Location: 413110 - 414291 (-)
Gene ID: HRGMv2_2005_1_400
Type: CAZyme
Location: 414281 - 415381 (-)
Type: CAZyme
Location: 414281 - 415381 (-)
Gene ID: HRGMv2_2005_1_401
Type: TC
Location: 415381 - 416559 (-)
Type: TC
Location: 415381 - 416559 (-)
Gene ID: HRGMv2_2005_1_402
Type: pfam
Location: 416531 - 417904 (-)
Type: pfam
Location: 416531 - 417904 (-)
Gene ID: HRGMv2_2005_1_403
Type: TC
Location: 417906 - 418853 (-)
Type: TC
Location: 417906 - 418853 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp900761225
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.