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Cluster: HRGMv2_2005_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2005_7 HRGMv2_2005_7_104 116595 117137 + 2.A.107.1.2
NULL(UNKNOWN) HRGMv2_2005_7 HRGMv2_2005_7_105 117513 117716 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2005_7 HRGMv2_2005_7_106 117784 118146 + Ribosomal_S30AE
CAZyme HRGMv2_2005_7 HRGMv2_2005_7_107 118192 118977 + GT2
pfam HRGMv2_2005_7 HRGMv2_2005_7_108 118980 119642 - N_methyl
STP HRGMv2_2005_7 HRGMv2_2005_7_109 119874 120731 - HEAT_PBS | HEAT_PBS
TC HRGMv2_2005_7 HRGMv2_2005_7_110 121041 122699 - 2.A.21.9.1
Gene ID: HRGMv2_2005_7_104
Type: TC
Location: 116595 - 117137 (+)
Gene ID: HRGMv2_2005_7_105
Type:
Location: 117513 - 117716 (+)
Gene ID: HRGMv2_2005_7_106
Type: pfam
Location: 117784 - 118146 (+)
Gene ID: HRGMv2_2005_7_107
Type: CAZyme
Location: 118192 - 118977 (+)
Gene ID: HRGMv2_2005_7_108
Type: pfam
Location: 118980 - 119642 (-)
Gene ID: HRGMv2_2005_7_109
Type: STP
Location: 119874 - 120731 (-)
Gene ID: HRGMv2_2005_7_110
Type: TC
Location: 121041 - 122699 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2005_7_105 vegetarian > omnivore 22.46638 0.02973
HRGMv2_2005_7_109 vegetarian > omnivore 1.25863 0.02973

🧭 Explore Read Mapping of CGC

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