Cluster: HRGMv2_2003_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2003
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2003_1 | HRGMv2_2003_1_47 | 44003 | 45025 | + | GT2 |
| pfam | HRGMv2_2003_1 | HRGMv2_2003_1_48 | 45031 | 45480 | - | DNA_binding_1 | Methyltransf_1N |
| TC | HRGMv2_2003_1 | HRGMv2_2003_1_49 | 45485 | 46111 | - | 9.B.27.2.5 |
| NULL(UNKNOWN) | HRGMv2_2003_1 | HRGMv2_2003_1_50 | 46293 | 47177 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2003_1 | HRGMv2_2003_1_51 | 47342 | 48460 | + | TPR_1 | TPR_1 |
| TC | HRGMv2_2003_1 | HRGMv2_2003_1_52 | 48471 | 49316 | - | 3.A.1.1.34 |
| TC | HRGMv2_2003_1 | HRGMv2_2003_1_53 | 49333 | 50205 | - | 3.A.1.1.34 |
Gene ID: HRGMv2_2003_1_47
Type: CAZyme
Location: 44003 - 45025 (+)
Type: CAZyme
Location: 44003 - 45025 (+)
Gene ID: HRGMv2_2003_1_48
Type: pfam
Location: 45031 - 45480 (-)
Type: pfam
Location: 45031 - 45480 (-)
Gene ID: HRGMv2_2003_1_49
Type: TC
Location: 45485 - 46111 (-)
Type: TC
Location: 45485 - 46111 (-)
Gene ID: HRGMv2_2003_1_50
Type:
Location: 46293 - 47177 (-)
Type:
Location: 46293 - 47177 (-)
Gene ID: HRGMv2_2003_1_51
Type: STP
Location: 47342 - 48460 (+)
Type: STP
Location: 47342 - 48460 (+)
Gene ID: HRGMv2_2003_1_52
Type: TC
Location: 48471 - 49316 (-)
Type: TC
Location: 48471 - 49316 (-)
Gene ID: HRGMv2_2003_1_53
Type: TC
Location: 49333 - 50205 (-)
Type: TC
Location: 49333 - 50205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp900555175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.