Cluster: HRGMv2_2002_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2002_3 | HRGMv2_2002_3_6 | 7843 | 9069 | - | 3.A.15.4.1 |
| TC | HRGMv2_2002_3 | HRGMv2_2002_3_7 | 9078 | 11087 | - | 3.A.15.4.1 |
| TC | HRGMv2_2002_3 | HRGMv2_2002_3_8 | 11107 | 13023 | - | 3.A.11.1.3 |
| NULL(UNKNOWN) | HRGMv2_2002_3 | HRGMv2_2002_3_9 | 13043 | 13777 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2002_3 | HRGMv2_2002_3_10 | 13945 | 14802 | - | PRK | AAA_18 |
| TC | HRGMv2_2002_3 | HRGMv2_2002_3_11 | 14955 | 16367 | + | 3.A.2.1.2 |
| pfam | HRGMv2_2002_3 | HRGMv2_2002_3_12 | 16499 | 16891 | + | ATP-synt_DE | ATP-synt_DE_N |
| pfam | HRGMv2_2002_3 | HRGMv2_2002_3_13 | 16896 | 17456 | + | Chromate_transp |
| TC | HRGMv2_2002_3 | HRGMv2_2002_3_14 | 17453 | 17986 | + | 2.A.51.1.6 |
| NULL(UNKNOWN) | HRGMv2_2002_3 | HRGMv2_2002_3_15 | 18055 | 18819 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_2002_3 | HRGMv2_2002_3_16 | 18816 | 20348 | - | S16.UNW |
| CAZyme | HRGMv2_2002_3 | HRGMv2_2002_3_17 | 20441 | 21418 | + | GT9 |
Gene ID: HRGMv2_2002_3_6
Type: TC
Location: 7843 - 9069 (-)
Type: TC
Location: 7843 - 9069 (-)
Gene ID: HRGMv2_2002_3_7
Type: TC
Location: 9078 - 11087 (-)
Type: TC
Location: 9078 - 11087 (-)
Gene ID: HRGMv2_2002_3_8
Type: TC
Location: 11107 - 13023 (-)
Type: TC
Location: 11107 - 13023 (-)
Gene ID: HRGMv2_2002_3_9
Type:
Location: 13043 - 13777 (-)
Type:
Location: 13043 - 13777 (-)
Gene ID: HRGMv2_2002_3_10
Type: pfam
Location: 13945 - 14802 (-)
Type: pfam
Location: 13945 - 14802 (-)
Gene ID: HRGMv2_2002_3_11
Type: TC
Location: 14955 - 16367 (+)
Type: TC
Location: 14955 - 16367 (+)
Gene ID: HRGMv2_2002_3_12
Type: pfam
Location: 16499 - 16891 (+)
Type: pfam
Location: 16499 - 16891 (+)
Gene ID: HRGMv2_2002_3_13
Type: pfam
Location: 16896 - 17456 (+)
Type: pfam
Location: 16896 - 17456 (+)
Gene ID: HRGMv2_2002_3_14
Type: TC
Location: 17453 - 17986 (+)
Type: TC
Location: 17453 - 17986 (+)
Gene ID: HRGMv2_2002_3_15
Type:
Location: 18055 - 18819 (+)
Type:
Location: 18055 - 18819 (+)
Gene ID: HRGMv2_2002_3_16
Type: peptidase
Location: 18816 - 20348 (-)
Type: peptidase
Location: 18816 - 20348 (-)
Gene ID: HRGMv2_2002_3_17
Type: CAZyme
Location: 20441 - 21418 (+)
Type: CAZyme
Location: 20441 - 21418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp001917115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.