Cluster: HRGMv2_2002_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2002
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2002_2 | HRGMv2_2002_2_245 | 222636 | 224288 | + | GT83 |
| NULL(UNKNOWN) | HRGMv2_2002_2 | HRGMv2_2002_2_246 | 224288 | 224824 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2002_2 | HRGMv2_2002_2_247 | 224983 | 225882 | + | TPR_1 | TPR_1 | TPR_1 |
| TC | HRGMv2_2002_2 | HRGMv2_2002_2_248 | 225917 | 227248 | - | 2.A.45.2.2 |
| TC | HRGMv2_2002_2 | HRGMv2_2002_2_249 | 227711 | 229660 | + | 8.A.59.4.2 |
Gene ID: HRGMv2_2002_2_245
Type: CAZyme
Location: 222636 - 224288 (+)
Type: CAZyme
Location: 222636 - 224288 (+)
Gene ID: HRGMv2_2002_2_246
Type:
Location: 224288 - 224824 (+)
Type:
Location: 224288 - 224824 (+)
Gene ID: HRGMv2_2002_2_247
Type: STP
Location: 224983 - 225882 (+)
Type: STP
Location: 224983 - 225882 (+)
Gene ID: HRGMv2_2002_2_248
Type: TC
Location: 225917 - 227248 (-)
Type: TC
Location: 225917 - 227248 (-)
Gene ID: HRGMv2_2002_2_249
Type: TC
Location: 227711 - 229660 (+)
Type: TC
Location: 227711 - 229660 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp001917115
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.