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Cluster: HRGMv2_2001_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2001_3 HRGMv2_2001_3_240 235512 236153 + 1.A.8.12.1
NULL(UNKNOWN) HRGMv2_2001_3 HRGMv2_2001_3_241 236265 237458 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2001_3 HRGMv2_2001_3_242 237601 238185 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2001_3 HRGMv2_2001_3_243 238185 239150 + GH3
STP HRGMv2_2001_3 HRGMv2_2001_3_244 239151 239429 - ACT
TC HRGMv2_2001_3 HRGMv2_2001_3_245 239405 240982 - 2.A.25.1.9
CAZyme HRGMv2_2001_3 HRGMv2_2001_3_246 241104 242171 - GT4
CAZyme HRGMv2_2001_3 HRGMv2_2001_3_247 242270 244501 + GH57
Gene ID: HRGMv2_2001_3_240
Type: TC
Location: 235512 - 236153 (+)
Gene ID: HRGMv2_2001_3_241
Type:
Location: 236265 - 237458 (+)
Gene ID: HRGMv2_2001_3_242
Type:
Location: 237601 - 238185 (+)
Gene ID: HRGMv2_2001_3_243
Type: CAZyme
Location: 238185 - 239150 (+)
Gene ID: HRGMv2_2001_3_244
Type: STP
Location: 239151 - 239429 (-)
Gene ID: HRGMv2_2001_3_245
Type: TC
Location: 239405 - 240982 (-)
Gene ID: HRGMv2_2001_3_246
Type: CAZyme
Location: 241104 - 242171 (-)
Gene ID: HRGMv2_2001_3_247
Type: CAZyme
Location: 242270 - 244501 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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