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Cluster: HRGMv2_2000_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2000_3 HRGMv2_2000_3_202 186825 187919 + GT2
pfam HRGMv2_2000_3 HRGMv2_2000_3_203 187912 190074 + PS_pyruv_trans
pfam HRGMv2_2000_3 HRGMv2_2000_3_204 190074 192212 + Radical_SAM
CAZyme HRGMv2_2000_3 HRGMv2_2000_3_205 192209 192802 + CE4
pfam HRGMv2_2000_3 HRGMv2_2000_3_206 192813 194018 + TylF | Methyltransf_24
TC HRGMv2_2000_3 HRGMv2_2000_3_207 194036 196903 + 3.A.1.106.1
Gene ID: HRGMv2_2000_3_202
Type: CAZyme
Location: 186825 - 187919 (+)
Gene ID: HRGMv2_2000_3_203
Type: pfam
Location: 187912 - 190074 (+)
Gene ID: HRGMv2_2000_3_204
Type: pfam
Location: 190074 - 192212 (+)
Gene ID: HRGMv2_2000_3_205
Type: CAZyme
Location: 192209 - 192802 (+)
Gene ID: HRGMv2_2000_3_206
Type: pfam
Location: 192813 - 194018 (+)
Gene ID: HRGMv2_2000_3_207
Type: TC
Location: 194036 - 196903 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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