Cluster: HRGMv2_2000_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2000
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2000_2 | HRGMv2_2000_2_153 | 155897 | 156877 | + | 9.B.146.1.6 |
| pfam | HRGMv2_2000_2 | HRGMv2_2000_2_154 | 156877 | 158241 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_2000_2 | HRGMv2_2000_2_155 | 158219 | 159400 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_2000_2 | HRGMv2_2000_2_156 | 159400 | 160542 | + | GT28 |
| pfam | HRGMv2_2000_2 | HRGMv2_2000_2_157 | 160532 | 161692 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_2000_2 | HRGMv2_2000_2_158 | 161667 | 163232 | - | GT2 |
Gene ID: HRGMv2_2000_2_153
Type: TC
Location: 155897 - 156877 (+)
Type: TC
Location: 155897 - 156877 (+)
Gene ID: HRGMv2_2000_2_154
Type: pfam
Location: 156877 - 158241 (+)
Type: pfam
Location: 156877 - 158241 (+)
Gene ID: HRGMv2_2000_2_155
Type: TC
Location: 158219 - 159400 (+)
Type: TC
Location: 158219 - 159400 (+)
Gene ID: HRGMv2_2000_2_156
Type: CAZyme
Location: 159400 - 160542 (+)
Type: CAZyme
Location: 159400 - 160542 (+)
Gene ID: HRGMv2_2000_2_157
Type: pfam
Location: 160532 - 161692 (+)
Type: pfam
Location: 160532 - 161692 (+)
Gene ID: HRGMv2_2000_2_158
Type: CAZyme
Location: 161667 - 163232 (-)
Type: CAZyme
Location: 161667 - 163232 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp000433095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.