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Cluster: HRGMv2_2000_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2000_1 HRGMv2_2000_1_69 63133 65364 - GH57
CAZyme HRGMv2_2000_1 HRGMv2_2000_1_70 65463 66524 + GT4
TC HRGMv2_2000_1 HRGMv2_2000_1_71 66646 68223 + 2.A.25.1.1
STP HRGMv2_2000_1 HRGMv2_2000_1_72 68199 68477 + ACT
CAZyme HRGMv2_2000_1 HRGMv2_2000_1_73 68474 69442 - GH3
NULL(UNKNOWN) HRGMv2_2000_1 HRGMv2_2000_1_74 69442 70026 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2000_1 HRGMv2_2000_1_75 70066 71259 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2000_1 HRGMv2_2000_1_76 71333 71974 - 1.A.8.12.1
Gene ID: HRGMv2_2000_1_69
Type: CAZyme
Location: 63133 - 65364 (-)
Gene ID: HRGMv2_2000_1_70
Type: CAZyme
Location: 65463 - 66524 (+)
Gene ID: HRGMv2_2000_1_71
Type: TC
Location: 66646 - 68223 (+)
Gene ID: HRGMv2_2000_1_72
Type: STP
Location: 68199 - 68477 (+)
Gene ID: HRGMv2_2000_1_73
Type: CAZyme
Location: 68474 - 69442 (-)
Gene ID: HRGMv2_2000_1_74
Type:
Location: 69442 - 70026 (-)
Gene ID: HRGMv2_2000_1_75
Type:
Location: 70066 - 71259 (-)
Gene ID: HRGMv2_2000_1_76
Type: TC
Location: 71333 - 71974 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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