Cluster: HRGMv2_1998_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1998
- CGC Family ID: CGCFAM_01464
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1998_3 | HRGMv2_1998_3_118 | 113822 | 116047 | - | GH57 |
| NULL(UNKNOWN) | HRGMv2_1998_3 | HRGMv2_1998_3_119 | 116080 | 116868 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_1998_3 | HRGMv2_1998_3_120 | 116865 | 117143 | - | ACT |
| TC | HRGMv2_1998_3 | HRGMv2_1998_3_121 | 117119 | 118699 | - | 2.A.25.1.1 |
| CAZyme | HRGMv2_1998_3 | HRGMv2_1998_3_122 | 118805 | 119872 | - | GT4 |
| STP | HRGMv2_1998_3 | HRGMv2_1998_3_123 | 119945 | 120436 | + | TPR_1 | TPR_1 | TPR_1 |
| CAZyme | HRGMv2_1998_3 | HRGMv2_1998_3_124 | 120428 | 121444 | - | GH3 |
Gene ID: HRGMv2_1998_3_118
Type: CAZyme
Location: 113822 - 116047 (-)
Type: CAZyme
Location: 113822 - 116047 (-)
Gene ID: HRGMv2_1998_3_119
Type:
Location: 116080 - 116868 (+)
Type:
Location: 116080 - 116868 (+)
Gene ID: HRGMv2_1998_3_120
Type: STP
Location: 116865 - 117143 (-)
Type: STP
Location: 116865 - 117143 (-)
Gene ID: HRGMv2_1998_3_121
Type: TC
Location: 117119 - 118699 (-)
Type: TC
Location: 117119 - 118699 (-)
Gene ID: HRGMv2_1998_3_122
Type: CAZyme
Location: 118805 - 119872 (-)
Type: CAZyme
Location: 118805 - 119872 (-)
Gene ID: HRGMv2_1998_3_123
Type: STP
Location: 119945 - 120436 (+)
Type: STP
Location: 119945 - 120436 (+)
Gene ID: HRGMv2_1998_3_124
Type: CAZyme
Location: 120428 - 121444 (-)
Type: CAZyme
Location: 120428 - 121444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.