Cluster: HRGMv2_1998_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1998
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1998_2 | HRGMv2_1998_2_2 | 1814 | 3940 | + | 3.A.1.109.1 |
| TC | HRGMv2_1998_2 | HRGMv2_1998_2_3 | 3924 | 5264 | + | 8.A.1.3.1 |
| NULL(UNKNOWN) | HRGMv2_1998_2 | HRGMv2_1998_2_4 | 6588 | 7268 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1998_2 | HRGMv2_1998_2_5 | 7315 | 9033 | - | GH57 |
Gene ID: HRGMv2_1998_2_2
Type: TC
Location: 1814 - 3940 (+)
Type: TC
Location: 1814 - 3940 (+)
Gene ID: HRGMv2_1998_2_3
Type: TC
Location: 3924 - 5264 (+)
Type: TC
Location: 3924 - 5264 (+)
Gene ID: HRGMv2_1998_2_4
Type:
Location: 6588 - 7268 (+)
Type:
Location: 6588 - 7268 (+)
Gene ID: HRGMv2_1998_2_5
Type: CAZyme
Location: 7315 - 9033 (-)
Type: CAZyme
Location: 7315 - 9033 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.