dbCAN Logo

Cluster: HRGMv2_1998_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1998_5 HRGMv2_1998_5_26 26989 27630 - GH23
pfam HRGMv2_1998_5 HRGMv2_1998_5_27 27932 28735 + PNP_UDP_1
TC HRGMv2_1998_5 HRGMv2_1998_5_28 28744 29013 + 9.A.4.2.3
TC HRGMv2_1998_5 HRGMv2_1998_5_29 29052 30392 + 2.A.38.1.1
TC HRGMv2_1998_5 HRGMv2_1998_5_30 30394 31863 + 2.A.38.1.5
TC HRGMv2_1998_5 HRGMv2_1998_5_31 31998 33443 + 1.B.17.2.5
TC HRGMv2_1998_5 HRGMv2_1998_5_32 33443 34612 + 2.A.6.2.23
TC HRGMv2_1998_5 HRGMv2_1998_5_33 34615 35319 + 3.A.1.122.2
TC HRGMv2_1998_5 HRGMv2_1998_5_34 35332 36558 + 3.A.1.122.2
Gene ID: HRGMv2_1998_5_26
Type: CAZyme
Location: 26989 - 27630 (-)
Gene ID: HRGMv2_1998_5_27
Type: pfam
Location: 27932 - 28735 (+)
Gene ID: HRGMv2_1998_5_28
Type: TC
Location: 28744 - 29013 (+)
Gene ID: HRGMv2_1998_5_29
Type: TC
Location: 29052 - 30392 (+)
Gene ID: HRGMv2_1998_5_30
Type: TC
Location: 30394 - 31863 (+)
Gene ID: HRGMv2_1998_5_31
Type: TC
Location: 31998 - 33443 (+)
Gene ID: HRGMv2_1998_5_32
Type: TC
Location: 33443 - 34612 (+)
Gene ID: HRGMv2_1998_5_33
Type: TC
Location: 34615 - 35319 (+)
Gene ID: HRGMv2_1998_5_34
Type: TC
Location: 35332 - 36558 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List