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Cluster: HRGMv2_1993_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1993_3 HRGMv2_1993_3_66 70332 71561 - 3.A.1.122.2
TC HRGMv2_1993_3 HRGMv2_1993_3_67 71693 72397 - 3.A.1.122.2
pfam HRGMv2_1993_3 HRGMv2_1993_3_68 72424 73599 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
pfam HRGMv2_1993_3 HRGMv2_1993_3_69 73599 75053 - OEP | OEP
TC HRGMv2_1993_3 HRGMv2_1993_3_70 75151 76623 - 2.A.38.1.5
TC HRGMv2_1993_3 HRGMv2_1993_3_71 76625 77965 - 2.A.38.1.1
TC HRGMv2_1993_3 HRGMv2_1993_3_72 78008 78277 - 9.A.4.2.1
pfam HRGMv2_1993_3 HRGMv2_1993_3_73 78292 79095 - PNP_UDP_1
CAZyme HRGMv2_1993_3 HRGMv2_1993_3_74 79425 80033 + GH23
Gene ID: HRGMv2_1993_3_66
Type: TC
Location: 70332 - 71561 (-)
Gene ID: HRGMv2_1993_3_67
Type: TC
Location: 71693 - 72397 (-)
Gene ID: HRGMv2_1993_3_68
Type: pfam
Location: 72424 - 73599 (-)
Gene ID: HRGMv2_1993_3_69
Type: pfam
Location: 73599 - 75053 (-)
Gene ID: HRGMv2_1993_3_70
Type: TC
Location: 75151 - 76623 (-)
Gene ID: HRGMv2_1993_3_71
Type: TC
Location: 76625 - 77965 (-)
Gene ID: HRGMv2_1993_3_72
Type: TC
Location: 78008 - 78277 (-)
Gene ID: HRGMv2_1993_3_73
Type: pfam
Location: 78292 - 79095 (-)
Gene ID: HRGMv2_1993_3_74
Type: CAZyme
Location: 79425 - 80033 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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