Cluster: HRGMv2_1993_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1993_1 | HRGMv2_1993_1_65 | 54676 | 56400 | + | GH57 |
| NULL(UNKNOWN) | HRGMv2_1993_1 | HRGMv2_1993_1_66 | 56462 | 57124 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_1993_1 | HRGMv2_1993_1_67 | 57213 | 57695 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1993_1 | HRGMv2_1993_1_68 | 58098 | 59726 | - | 3.A.1.121.4 |
Gene ID: HRGMv2_1993_1_65
Type: CAZyme
Location: 54676 - 56400 (+)
Type: CAZyme
Location: 54676 - 56400 (+)
Gene ID: HRGMv2_1993_1_66
Type:
Location: 56462 - 57124 (-)
Type:
Location: 56462 - 57124 (-)
Gene ID: HRGMv2_1993_1_67
Type:
Location: 57213 - 57695 (-)
Type:
Location: 57213 - 57695 (-)
Gene ID: HRGMv2_1993_1_68
Type: TC
Location: 58098 - 59726 (-)
Type: TC
Location: 58098 - 59726 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatenecus
Species
Scatenecus sp003150395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.