Cluster: HRGMv2_1989_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1989
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1989_19 | HRGMv2_1989_19_17 | 13524 | 14183 | + | GH23 |
| pfam | HRGMv2_1989_19 | HRGMv2_1989_19_18 | 14201 | 14527 | + | FliE |
| TC | HRGMv2_1989_19 | HRGMv2_1989_19_19 | 14597 | 16333 | + | 3.A.6.2.1 |
| NULL(UNKNOWN) | HRGMv2_1989_19 | HRGMv2_1989_19_20 | 16373 | 17449 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1989_19 | HRGMv2_1989_19_21 | 17439 | 18302 | + | FliH |
| TC | HRGMv2_1989_19 | HRGMv2_1989_19_22 | 18310 | 20403 | + | 1.A.104.1.1 |
Gene ID: HRGMv2_1989_19_17
Type: CAZyme
Location: 13524 - 14183 (+)
Type: CAZyme
Location: 13524 - 14183 (+)
Gene ID: HRGMv2_1989_19_18
Type: pfam
Location: 14201 - 14527 (+)
Type: pfam
Location: 14201 - 14527 (+)
Gene ID: HRGMv2_1989_19_19
Type: TC
Location: 14597 - 16333 (+)
Type: TC
Location: 14597 - 16333 (+)
Gene ID: HRGMv2_1989_19_20
Type:
Location: 16373 - 17449 (+)
Type:
Location: 16373 - 17449 (+)
Gene ID: HRGMv2_1989_19_21
Type: pfam
Location: 17439 - 18302 (+)
Type: pfam
Location: 17439 - 18302 (+)
Gene ID: HRGMv2_1989_19_22
Type: TC
Location: 18310 - 20403 (+)
Type: TC
Location: 18310 - 20403 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
RUG14156
Genus
Galligastranaerophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.