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Cluster: HRGMv2_1989_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1989_17 HRGMv2_1989_17_10 9859 11817 - 8.A.59.2.2
TC HRGMv2_1989_17 HRGMv2_1989_17_11 11951 13165 + 9.B.174.1.1
CAZyme HRGMv2_1989_17 HRGMv2_1989_17_12 13249 14178 + GT11
NULL(UNKNOWN) HRGMv2_1989_17 HRGMv2_1989_17_13 14335 14577 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1989_17 HRGMv2_1989_17_14 14921 16228 + 2.A.6.2.11
TC HRGMv2_1989_17 HRGMv2_1989_17_15 16230 17057 + 3.A.1.105.15
TC HRGMv2_1989_17 HRGMv2_1989_17_16 17054 18751 + 3.A.1.105.15
TC HRGMv2_1989_17 HRGMv2_1989_17_17 18748 19872 + 3.A.1.105.15
TC HRGMv2_1989_17 HRGMv2_1989_17_18 19866 21005 + 3.A.1.105.15
Gene ID: HRGMv2_1989_17_10
Type: TC
Location: 9859 - 11817 (-)
Gene ID: HRGMv2_1989_17_11
Type: TC
Location: 11951 - 13165 (+)
Gene ID: HRGMv2_1989_17_12
Type: CAZyme
Location: 13249 - 14178 (+)
Gene ID: HRGMv2_1989_17_13
Type:
Location: 14335 - 14577 (-)
Gene ID: HRGMv2_1989_17_14
Type: TC
Location: 14921 - 16228 (+)
Gene ID: HRGMv2_1989_17_15
Type: TC
Location: 16230 - 17057 (+)
Gene ID: HRGMv2_1989_17_16
Type: TC
Location: 17054 - 18751 (+)
Gene ID: HRGMv2_1989_17_17
Type: TC
Location: 18748 - 19872 (+)
Gene ID: HRGMv2_1989_17_18
Type: TC
Location: 19866 - 21005 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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