Cluster: HRGMv2_1989_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1989
- CGC Family ID: CGCFAM_02848
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1989_11 | HRGMv2_1989_11_28 | 29962 | 30942 | + | GT8 |
| TC | HRGMv2_1989_11 | HRGMv2_1989_11_29 | 30950 | 32302 | - | 9.A.40.2.1 |
| NULL(UNKNOWN) | HRGMv2_1989_11 | HRGMv2_1989_11_30 | 32444 | 32782 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1989_11 | HRGMv2_1989_11_31 | 32759 | 33457 | - | NMN_transporter |
| TC | HRGMv2_1989_11 | HRGMv2_1989_11_32 | 33504 | 34598 | - | 3.A.15.2.1 |
Gene ID: HRGMv2_1989_11_28
Type: CAZyme
Location: 29962 - 30942 (+)
Type: CAZyme
Location: 29962 - 30942 (+)
Gene ID: HRGMv2_1989_11_29
Type: TC
Location: 30950 - 32302 (-)
Type: TC
Location: 30950 - 32302 (-)
Gene ID: HRGMv2_1989_11_30
Type:
Location: 32444 - 32782 (+)
Type:
Location: 32444 - 32782 (+)
Gene ID: HRGMv2_1989_11_31
Type: pfam
Location: 32759 - 33457 (-)
Type: pfam
Location: 32759 - 33457 (-)
Gene ID: HRGMv2_1989_11_32
Type: TC
Location: 33504 - 34598 (-)
Type: TC
Location: 33504 - 34598 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
RUG14156
Genus
Galligastranaerophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.