Cluster: HRGMv2_1989_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1989
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1989_10 | HRGMv2_1989_10_54 | 43693 | 45294 | - | 9.B.34.1.2 |
| pfam | HRGMv2_1989_10 | HRGMv2_1989_10_55 | 45381 | 45647 | + | YlxR |
| pfam | HRGMv2_1989_10 | HRGMv2_1989_10_56 | 45697 | 47766 | + | tRNA_synt_2f |
| CAZyme | HRGMv2_1989_10 | HRGMv2_1989_10_57 | 47777 | 48898 | + | GT4 |
| pfam | HRGMv2_1989_10 | HRGMv2_1989_10_58 | 48938 | 49591 | + | NusB |
| TC | HRGMv2_1989_10 | HRGMv2_1989_10_59 | 49584 | 50534 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_1989_10_54
Type: TC
Location: 43693 - 45294 (-)
Type: TC
Location: 43693 - 45294 (-)
Gene ID: HRGMv2_1989_10_55
Type: pfam
Location: 45381 - 45647 (+)
Type: pfam
Location: 45381 - 45647 (+)
Gene ID: HRGMv2_1989_10_56
Type: pfam
Location: 45697 - 47766 (+)
Type: pfam
Location: 45697 - 47766 (+)
Gene ID: HRGMv2_1989_10_57
Type: CAZyme
Location: 47777 - 48898 (+)
Type: CAZyme
Location: 47777 - 48898 (+)
Gene ID: HRGMv2_1989_10_58
Type: pfam
Location: 48938 - 49591 (+)
Type: pfam
Location: 48938 - 49591 (+)
Gene ID: HRGMv2_1989_10_59
Type: TC
Location: 49584 - 50534 (+)
Type: TC
Location: 49584 - 50534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
RUG14156
Genus
Galligastranaerophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.