Cluster: HRGMv2_1989_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1989
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1989_7 | HRGMv2_1989_7_8 | 5565 | 6539 | + | 9.B.146.1.6 |
| pfam | HRGMv2_1989_7 | HRGMv2_1989_7_9 | 6543 | 7874 | + | Mur_ligase_C | Mur_ligase_M | MurD_N | MurD-like_N |
| TC | HRGMv2_1989_7 | HRGMv2_1989_7_10 | 7858 | 9021 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_1989_7 | HRGMv2_1989_7_11 | 9002 | 10111 | + | GT28 |
Gene ID: HRGMv2_1989_7_8
Type: TC
Location: 5565 - 6539 (+)
Type: TC
Location: 5565 - 6539 (+)
Gene ID: HRGMv2_1989_7_9
Type: pfam
Location: 6543 - 7874 (+)
Type: pfam
Location: 6543 - 7874 (+)
Gene ID: HRGMv2_1989_7_10
Type: TC
Location: 7858 - 9021 (+)
Type: TC
Location: 7858 - 9021 (+)
Gene ID: HRGMv2_1989_7_11
Type: CAZyme
Location: 9002 - 10111 (+)
Type: CAZyme
Location: 9002 - 10111 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
RUG14156
Genus
Galligastranaerophilus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.