Cluster: HRGMv2_1987_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_1987
- CGC Family ID: CGCFAM_01464
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1987_2 | HRGMv2_1987_2_261 | 252901 | 253863 | + | GH3 |
| STP | HRGMv2_1987_2 | HRGMv2_1987_2_262 | 253855 | 254343 | - | TPR_1 | TPR_1 | TPR_1 |
| CAZyme | HRGMv2_1987_2 | HRGMv2_1987_2_263 | 254431 | 255498 | + | GT4 |
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_264 | 255614 | 257194 | + | 2.A.25.1.3 |
| STP | HRGMv2_1987_2 | HRGMv2_1987_2_265 | 257170 | 257448 | + | ACT |
| CAZyme | HRGMv2_1987_2 | HRGMv2_1987_2_266 | 257530 | 259755 | + | GH57 |
Gene ID: HRGMv2_1987_2_261
Type: CAZyme
Location: 252901 - 253863 (+)
Type: CAZyme
Location: 252901 - 253863 (+)
Gene ID: HRGMv2_1987_2_262
Type: STP
Location: 253855 - 254343 (-)
Type: STP
Location: 253855 - 254343 (-)
Gene ID: HRGMv2_1987_2_263
Type: CAZyme
Location: 254431 - 255498 (+)
Type: CAZyme
Location: 254431 - 255498 (+)
Gene ID: HRGMv2_1987_2_264
Type: TC
Location: 255614 - 257194 (+)
Type: TC
Location: 255614 - 257194 (+)
Gene ID: HRGMv2_1987_2_265
Type: STP
Location: 257170 - 257448 (+)
Type: STP
Location: 257170 - 257448 (+)
Gene ID: HRGMv2_1987_2_266
Type: CAZyme
Location: 257530 - 259755 (+)
Type: CAZyme
Location: 257530 - 259755 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp000437435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.