Cluster: HRGMv2_1987_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1987
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_53 | 55370 | 56593 | - | 3.A.15.4.1 |
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_54 | 56602 | 58611 | - | 3.A.15.4.1 |
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_55 | 58640 | 60577 | - | 3.A.15.4.1 |
| NULL(UNKNOWN) | HRGMv2_1987_2 | HRGMv2_1987_2_56 | 60605 | 61333 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1987_2 | HRGMv2_1987_2_57 | 61565 | 62422 | - | PRK | AAA_18 |
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_58 | 62578 | 63987 | + | 3.A.2.1.2 |
| pfam | HRGMv2_1987_2 | HRGMv2_1987_2_59 | 63994 | 64386 | + | ATP-synt_DE | ATP-synt_DE_N |
| pfam | HRGMv2_1987_2 | HRGMv2_1987_2_60 | 64503 | 65066 | + | Chromate_transp |
| TC | HRGMv2_1987_2 | HRGMv2_1987_2_61 | 65063 | 65599 | + | 2.A.51.1.6 |
| NULL(UNKNOWN) | HRGMv2_1987_2 | HRGMv2_1987_2_62 | 65792 | 66415 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_1987_2 | HRGMv2_1987_2_63 | 66426 | 67949 | - | S16.UNW |
| CAZyme | HRGMv2_1987_2 | HRGMv2_1987_2_64 | 67992 | 68969 | + | GT9 |
Gene ID: HRGMv2_1987_2_53
Type: TC
Location: 55370 - 56593 (-)
Type: TC
Location: 55370 - 56593 (-)
Gene ID: HRGMv2_1987_2_54
Type: TC
Location: 56602 - 58611 (-)
Type: TC
Location: 56602 - 58611 (-)
Gene ID: HRGMv2_1987_2_55
Type: TC
Location: 58640 - 60577 (-)
Type: TC
Location: 58640 - 60577 (-)
Gene ID: HRGMv2_1987_2_56
Type:
Location: 60605 - 61333 (-)
Type:
Location: 60605 - 61333 (-)
Gene ID: HRGMv2_1987_2_57
Type: pfam
Location: 61565 - 62422 (-)
Type: pfam
Location: 61565 - 62422 (-)
Gene ID: HRGMv2_1987_2_58
Type: TC
Location: 62578 - 63987 (+)
Type: TC
Location: 62578 - 63987 (+)
Gene ID: HRGMv2_1987_2_59
Type: pfam
Location: 63994 - 64386 (+)
Type: pfam
Location: 63994 - 64386 (+)
Gene ID: HRGMv2_1987_2_60
Type: pfam
Location: 64503 - 65066 (+)
Type: pfam
Location: 64503 - 65066 (+)
Gene ID: HRGMv2_1987_2_61
Type: TC
Location: 65063 - 65599 (+)
Type: TC
Location: 65063 - 65599 (+)
Gene ID: HRGMv2_1987_2_62
Type:
Location: 65792 - 66415 (+)
Type:
Location: 65792 - 66415 (+)
Gene ID: HRGMv2_1987_2_63
Type: peptidase
Location: 66426 - 67949 (-)
Type: peptidase
Location: 66426 - 67949 (-)
Gene ID: HRGMv2_1987_2_64
Type: CAZyme
Location: 67992 - 68969 (+)
Type: CAZyme
Location: 67992 - 68969 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp000437435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.