Cluster: HRGMv2_1987_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1987
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1987_1 | HRGMv2_1987_1_459 | 472237 | 473802 | + | GT2 |
| pfam | HRGMv2_1987_1 | HRGMv2_1987_1_460 | 473777 | 474937 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_1987_1 | HRGMv2_1987_1_461 | 474927 | 476027 | - | GT28 |
| TC | HRGMv2_1987_1 | HRGMv2_1987_1_462 | 476027 | 477205 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1987_1 | HRGMv2_1987_1_463 | 477183 | 478550 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1987_1 | HRGMv2_1987_1_464 | 478550 | 479530 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1987_1_459
Type: CAZyme
Location: 472237 - 473802 (+)
Type: CAZyme
Location: 472237 - 473802 (+)
Gene ID: HRGMv2_1987_1_460
Type: pfam
Location: 473777 - 474937 (-)
Type: pfam
Location: 473777 - 474937 (-)
Gene ID: HRGMv2_1987_1_461
Type: CAZyme
Location: 474927 - 476027 (-)
Type: CAZyme
Location: 474927 - 476027 (-)
Gene ID: HRGMv2_1987_1_462
Type: TC
Location: 476027 - 477205 (-)
Type: TC
Location: 476027 - 477205 (-)
Gene ID: HRGMv2_1987_1_463
Type: pfam
Location: 477183 - 478550 (-)
Type: pfam
Location: 477183 - 478550 (-)
Gene ID: HRGMv2_1987_1_464
Type: TC
Location: 478550 - 479530 (-)
Type: TC
Location: 478550 - 479530 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Species
Stercorousia sp000437435
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.