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Cluster: HRGMv2_1987_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1987_1 HRGMv2_1987_1_330 345221 346195 + 8.A.21.2.2
NULL(UNKNOWN) HRGMv2_1987_1 HRGMv2_1987_1_331 346266 346646 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1987_1 HRGMv2_1987_1_332 346736 348514 + tRNA-synt_2 | tRNA_anti-codon | GAD
TC HRGMv2_1987_1 HRGMv2_1987_1_333 348580 349473 - 2.A.7.30.1
CAZyme HRGMv2_1987_1 HRGMv2_1987_1_334 349505 350944 - GT5
Gene ID: HRGMv2_1987_1_330
Type: TC
Location: 345221 - 346195 (+)
Gene ID: HRGMv2_1987_1_331
Type:
Location: 346266 - 346646 (+)
Gene ID: HRGMv2_1987_1_332
Type: pfam
Location: 346736 - 348514 (+)
Gene ID: HRGMv2_1987_1_333
Type: TC
Location: 348580 - 349473 (-)
Gene ID: HRGMv2_1987_1_334
Type: CAZyme
Location: 349505 - 350944 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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