dbCAN Logo

Cluster: HRGMv2_1987_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1987_3 HRGMv2_1987_3_114 112075 112731 - GH23
pfam HRGMv2_1987_3 HRGMv2_1987_3_115 113031 113834 + PNP_UDP_1
TC HRGMv2_1987_3 HRGMv2_1987_3_116 113848 114117 + 9.A.4.2.3
NULL(UNKNOWN) HRGMv2_1987_3 HRGMv2_1987_3_117 114076 115056 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1987_3 HRGMv2_1987_3_118 115145 116485 + 2.A.38.1.1
TC HRGMv2_1987_3 HRGMv2_1987_3_119 116487 117956 + 2.A.38.1.5
NULL(UNKNOWN) HRGMv2_1987_3 HRGMv2_1987_3_120 117953 118672 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1987_3 HRGMv2_1987_3_121 118819 120264 + 1.B.17.2.5
TC HRGMv2_1987_3 HRGMv2_1987_3_122 120264 121442 + 2.A.6.2.23
TC HRGMv2_1987_3 HRGMv2_1987_3_123 121446 122150 + 3.A.1.122.2
TC HRGMv2_1987_3 HRGMv2_1987_3_124 122162 123388 + 3.A.1.122.2
Gene ID: HRGMv2_1987_3_114
Type: CAZyme
Location: 112075 - 112731 (-)
Gene ID: HRGMv2_1987_3_115
Type: pfam
Location: 113031 - 113834 (+)
Gene ID: HRGMv2_1987_3_116
Type: TC
Location: 113848 - 114117 (+)
Gene ID: HRGMv2_1987_3_117
Type:
Location: 114076 - 115056 (-)
Gene ID: HRGMv2_1987_3_118
Type: TC
Location: 115145 - 116485 (+)
Gene ID: HRGMv2_1987_3_119
Type: TC
Location: 116487 - 117956 (+)
Gene ID: HRGMv2_1987_3_120
Type:
Location: 117953 - 118672 (-)
Gene ID: HRGMv2_1987_3_121
Type: TC
Location: 118819 - 120264 (+)
Gene ID: HRGMv2_1987_3_122
Type: TC
Location: 120264 - 121442 (+)
Gene ID: HRGMv2_1987_3_123
Type: TC
Location: 121446 - 122150 (+)
Gene ID: HRGMv2_1987_3_124
Type: TC
Location: 122162 - 123388 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List