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Cluster: HRGMv2_1986_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1986_6 HRGMv2_1986_6_86 85495 86721 - 3.A.1.122.2
TC HRGMv2_1986_6 HRGMv2_1986_6_87 86734 87438 - 3.A.1.122.2
TC HRGMv2_1986_6 HRGMv2_1986_6_88 87444 88634 - 2.A.6.2.23
TC HRGMv2_1986_6 HRGMv2_1986_6_89 88634 90079 - 1.B.17.2.5
NULL(UNKNOWN) HRGMv2_1986_6 HRGMv2_1986_6_90 90228 90947 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1986_6 HRGMv2_1986_6_91 90944 92413 - 2.A.38.1.1
TC HRGMv2_1986_6 HRGMv2_1986_6_92 92415 93755 - 2.A.38.1.1
NULL(UNKNOWN) HRGMv2_1986_6 HRGMv2_1986_6_93 93844 94824 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1986_6 HRGMv2_1986_6_94 94783 95052 - 9.A.4.2.3
pfam HRGMv2_1986_6 HRGMv2_1986_6_95 95066 95869 - PNP_UDP_1
CAZyme HRGMv2_1986_6 HRGMv2_1986_6_96 96170 96826 + GH23
Gene ID: HRGMv2_1986_6_86
Type: TC
Location: 85495 - 86721 (-)
Gene ID: HRGMv2_1986_6_87
Type: TC
Location: 86734 - 87438 (-)
Gene ID: HRGMv2_1986_6_88
Type: TC
Location: 87444 - 88634 (-)
Gene ID: HRGMv2_1986_6_89
Type: TC
Location: 88634 - 90079 (-)
Gene ID: HRGMv2_1986_6_90
Type:
Location: 90228 - 90947 (+)
Gene ID: HRGMv2_1986_6_91
Type: TC
Location: 90944 - 92413 (-)
Gene ID: HRGMv2_1986_6_92
Type: TC
Location: 92415 - 93755 (-)
Gene ID: HRGMv2_1986_6_93
Type:
Location: 93844 - 94824 (+)
Gene ID: HRGMv2_1986_6_94
Type: TC
Location: 94783 - 95052 (-)
Gene ID: HRGMv2_1986_6_95
Type: pfam
Location: 95066 - 95869 (-)
Gene ID: HRGMv2_1986_6_96
Type: CAZyme
Location: 96170 - 96826 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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