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Cluster: HRGMv2_1986_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1986_4 HRGMv2_1986_4_45 38676 40940 - GH57
NULL(UNKNOWN) HRGMv2_1986_4 HRGMv2_1986_4_46 40970 41728 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1986_4 HRGMv2_1986_4_47 41725 42003 - ACT
TC HRGMv2_1986_4 HRGMv2_1986_4_48 41979 43559 - 2.A.25.1.4
CAZyme HRGMv2_1986_4 HRGMv2_1986_4_49 43674 44753 - GT4
STP HRGMv2_1986_4 HRGMv2_1986_4_50 44842 45330 + TPR_1 | TPR_1 | TPR_1
NULL(UNKNOWN) HRGMv2_1986_4 HRGMv2_1986_4_51 45475 45804 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1986_4 HRGMv2_1986_4_52 45995 46975 - GH3
Gene ID: HRGMv2_1986_4_45
Type: CAZyme
Location: 38676 - 40940 (-)
Gene ID: HRGMv2_1986_4_46
Type:
Location: 40970 - 41728 (+)
Gene ID: HRGMv2_1986_4_47
Type: STP
Location: 41725 - 42003 (-)
Gene ID: HRGMv2_1986_4_48
Type: TC
Location: 41979 - 43559 (-)
Gene ID: HRGMv2_1986_4_49
Type: CAZyme
Location: 43674 - 44753 (-)
Gene ID: HRGMv2_1986_4_50
Type: STP
Location: 44842 - 45330 (+)
Gene ID: HRGMv2_1986_4_51
Type:
Location: 45475 - 45804 (-)
Gene ID: HRGMv2_1986_4_52
Type: CAZyme
Location: 45995 - 46975 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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