Cluster: HRGMv2_1986_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1986
- CGC Family ID: CGCFAM_06085
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1986_13 | HRGMv2_1986_13_57 | 57655 | 58878 | - | 3.A.15.4.1 |
| TC | HRGMv2_1986_13 | HRGMv2_1986_13_58 | 58887 | 60896 | - | 3.A.15.4.1 |
| TC | HRGMv2_1986_13 | HRGMv2_1986_13_59 | 60914 | 62830 | - | 3.A.15.4.1 |
| NULL(UNKNOWN) | HRGMv2_1986_13 | HRGMv2_1986_13_60 | 62857 | 63585 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_1986_13 | HRGMv2_1986_13_61 | 63813 | 64670 | - | PRK | AAA_18 |
| TC | HRGMv2_1986_13 | HRGMv2_1986_13_62 | 64827 | 66233 | + | 3.A.2.1.2 |
| pfam | HRGMv2_1986_13 | HRGMv2_1986_13_63 | 66322 | 66714 | + | ATP-synt_DE | ATP-synt_DE_N |
| pfam | HRGMv2_1986_13 | HRGMv2_1986_13_64 | 66838 | 67401 | + | Chromate_transp |
| TC | HRGMv2_1986_13 | HRGMv2_1986_13_65 | 67398 | 67934 | + | 2.A.51.1.6 |
| NULL(UNKNOWN) | HRGMv2_1986_13 | HRGMv2_1986_13_66 | 68126 | 68749 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | HRGMv2_1986_13 | HRGMv2_1986_13_67 | 68761 | 70281 | - | S16.UNW |
| CAZyme | HRGMv2_1986_13 | HRGMv2_1986_13_68 | 70324 | 71301 | + | GT9 |
Gene ID: HRGMv2_1986_13_57
Type: TC
Location: 57655 - 58878 (-)
Type: TC
Location: 57655 - 58878 (-)
Gene ID: HRGMv2_1986_13_58
Type: TC
Location: 58887 - 60896 (-)
Type: TC
Location: 58887 - 60896 (-)
Gene ID: HRGMv2_1986_13_59
Type: TC
Location: 60914 - 62830 (-)
Type: TC
Location: 60914 - 62830 (-)
Gene ID: HRGMv2_1986_13_60
Type:
Location: 62857 - 63585 (-)
Type:
Location: 62857 - 63585 (-)
Gene ID: HRGMv2_1986_13_61
Type: pfam
Location: 63813 - 64670 (-)
Type: pfam
Location: 63813 - 64670 (-)
Gene ID: HRGMv2_1986_13_62
Type: TC
Location: 64827 - 66233 (+)
Type: TC
Location: 64827 - 66233 (+)
Gene ID: HRGMv2_1986_13_63
Type: pfam
Location: 66322 - 66714 (+)
Type: pfam
Location: 66322 - 66714 (+)
Gene ID: HRGMv2_1986_13_64
Type: pfam
Location: 66838 - 67401 (+)
Type: pfam
Location: 66838 - 67401 (+)
Gene ID: HRGMv2_1986_13_65
Type: TC
Location: 67398 - 67934 (+)
Type: TC
Location: 67398 - 67934 (+)
Gene ID: HRGMv2_1986_13_66
Type:
Location: 68126 - 68749 (+)
Type:
Location: 68126 - 68749 (+)
Gene ID: HRGMv2_1986_13_67
Type: peptidase
Location: 68761 - 70281 (-)
Type: peptidase
Location: 68761 - 70281 (-)
Gene ID: HRGMv2_1986_13_68
Type: CAZyme
Location: 70324 - 71301 (+)
Type: CAZyme
Location: 70324 - 71301 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Stercorousia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.