Cluster: HRGMv2_1984_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1984
- CGC Family ID: CGCFAM_01464
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1984_38 | HRGMv2_1984_38_14 | 11779 | 12417 | + | 1.A.8.12.1 |
| NULL(UNKNOWN) | HRGMv2_1984_38 | HRGMv2_1984_38_15 | 12490 | 13674 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_1984_38 | HRGMv2_1984_38_16 | 13687 | 14271 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1984_38 | HRGMv2_1984_38_17 | 14319 | 15293 | + | GH3 |
| STP | HRGMv2_1984_38 | HRGMv2_1984_38_18 | 15290 | 15568 | - | ACT |
| TC | HRGMv2_1984_38 | HRGMv2_1984_38_19 | 15547 | 17127 | - | 2.A.25.1.4 |
| CAZyme | HRGMv2_1984_38 | HRGMv2_1984_38_20 | 17228 | 18292 | - | GT4 |
Gene ID: HRGMv2_1984_38_14
Type: TC
Location: 11779 - 12417 (+)
Type: TC
Location: 11779 - 12417 (+)
Gene ID: HRGMv2_1984_38_15
Type:
Location: 12490 - 13674 (+)
Type:
Location: 12490 - 13674 (+)
Gene ID: HRGMv2_1984_38_16
Type:
Location: 13687 - 14271 (+)
Type:
Location: 13687 - 14271 (+)
Gene ID: HRGMv2_1984_38_17
Type: CAZyme
Location: 14319 - 15293 (+)
Type: CAZyme
Location: 14319 - 15293 (+)
Gene ID: HRGMv2_1984_38_18
Type: STP
Location: 15290 - 15568 (-)
Type: STP
Location: 15290 - 15568 (-)
Gene ID: HRGMv2_1984_38_19
Type: TC
Location: 15547 - 17127 (-)
Type: TC
Location: 15547 - 17127 (-)
Gene ID: HRGMv2_1984_38_20
Type: CAZyme
Location: 17228 - 18292 (-)
Type: CAZyme
Location: 17228 - 18292 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
Scatousia
Species
Scatousia sp000431315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.