Cluster: HRGMv2_1982_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1982
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1982_8 | HRGMv2_1982_8_29 | 25527 | 26636 | - | GT28 |
| TC | HRGMv2_1982_8 | HRGMv2_1982_8_30 | 26638 | 27789 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1982_8 | HRGMv2_1982_8_31 | 27767 | 29116 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_1982_8 | HRGMv2_1982_8_32 | 29136 | 30098 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_1982_8_29
Type: CAZyme
Location: 25527 - 26636 (-)
Type: CAZyme
Location: 25527 - 26636 (-)
Gene ID: HRGMv2_1982_8_30
Type: TC
Location: 26638 - 27789 (-)
Type: TC
Location: 26638 - 27789 (-)
Gene ID: HRGMv2_1982_8_31
Type: pfam
Location: 27767 - 29116 (-)
Type: pfam
Location: 27767 - 29116 (-)
Gene ID: HRGMv2_1982_8_32
Type: TC
Location: 29136 - 30098 (-)
Type: TC
Location: 29136 - 30098 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UMGS1477
Species
UMGS1477 sp900552205
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.