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Cluster: HRGMv2_1981_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1981_2 HRGMv2_1981_2_214 205722 208328 - 3.A.9.1.2
TC HRGMv2_1981_2 HRGMv2_1981_2_215 208506 209249 - 3.A.1.27.1
pfam HRGMv2_1981_2 HRGMv2_1981_2_216 209242 210162 - Aminotran_4
CAZyme HRGMv2_1981_2 HRGMv2_1981_2_217 210403 212316 + GH77
CAZyme HRGMv2_1981_2 HRGMv2_1981_2_218 212326 213309 + CE9
NULL(UNKNOWN) HRGMv2_1981_2 HRGMv2_1981_2_219 213418 213606 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1981_2 HRGMv2_1981_2_220 213706 214644 - RNase_T
CAZyme HRGMv2_1981_2 HRGMv2_1981_2_221 214981 215592 + GH23
Gene ID: HRGMv2_1981_2_214
Type: TC
Location: 205722 - 208328 (-)
Gene ID: HRGMv2_1981_2_215
Type: TC
Location: 208506 - 209249 (-)
Gene ID: HRGMv2_1981_2_216
Type: pfam
Location: 209242 - 210162 (-)
Gene ID: HRGMv2_1981_2_217
Type: CAZyme
Location: 210403 - 212316 (+)
Gene ID: HRGMv2_1981_2_218
Type: CAZyme
Location: 212326 - 213309 (+)
Gene ID: HRGMv2_1981_2_219
Type:
Location: 213418 - 213606 (+)
Gene ID: HRGMv2_1981_2_220
Type: pfam
Location: 213706 - 214644 (-)
Gene ID: HRGMv2_1981_2_221
Type: CAZyme
Location: 214981 - 215592 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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