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Cluster: HRGMv2_1981_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1981_1 HRGMv2_1981_1_400 405862 406983 - 8.A.59.4.2
TC HRGMv2_1981_1 HRGMv2_1981_1_401 407205 409073 + 9.A.40.1.2
CAZyme HRGMv2_1981_1 HRGMv2_1981_1_402 409103 410554 - GT5
NULL(UNKNOWN) HRGMv2_1981_1 HRGMv2_1981_1_403 410658 412523 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_1981_1 HRGMv2_1981_1_404 412551 414374 - Gly_rich_2
TC HRGMv2_1981_1 HRGMv2_1981_1_405 414558 416192 - 2.A.3.3.22
pfam HRGMv2_1981_1 HRGMv2_1981_1_406 416208 417104 - tRNA-synt_2e
TC HRGMv2_1981_1 HRGMv2_1981_1_407 417288 418517 - 9.B.174.1.1
Gene ID: HRGMv2_1981_1_400
Type: TC
Location: 405862 - 406983 (-)
Gene ID: HRGMv2_1981_1_401
Type: TC
Location: 407205 - 409073 (+)
Gene ID: HRGMv2_1981_1_402
Type: CAZyme
Location: 409103 - 410554 (-)
Gene ID: HRGMv2_1981_1_403
Type:
Location: 410658 - 412523 (-)
Gene ID: HRGMv2_1981_1_404
Type: pfam
Location: 412551 - 414374 (-)
Gene ID: HRGMv2_1981_1_405
Type: TC
Location: 414558 - 416192 (-)
Gene ID: HRGMv2_1981_1_406
Type: pfam
Location: 416208 - 417104 (-)
Gene ID: HRGMv2_1981_1_407
Type: TC
Location: 417288 - 418517 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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