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Cluster: HRGMv2_1981_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1981_1 HRGMv2_1981_1_267 261603 262481 - 1.A.23.3.1
TC HRGMv2_1981_1 HRGMv2_1981_1_268 262632 263405 + 3.A.6.2.1
TC HRGMv2_1981_1 HRGMv2_1981_1_269 263421 263690 + 3.A.6.2.1
TC HRGMv2_1981_1 HRGMv2_1981_1_270 263705 264490 + 3.A.6.3.1
TC HRGMv2_1981_1 HRGMv2_1981_1_271 264519 265640 + 3.A.6.2.1
CAZyme HRGMv2_1981_1 HRGMv2_1981_1_272 265663 267717 - GH13
Gene ID: HRGMv2_1981_1_267
Type: TC
Location: 261603 - 262481 (-)
Gene ID: HRGMv2_1981_1_268
Type: TC
Location: 262632 - 263405 (+)
Gene ID: HRGMv2_1981_1_269
Type: TC
Location: 263421 - 263690 (+)
Gene ID: HRGMv2_1981_1_270
Type: TC
Location: 263705 - 264490 (+)
Gene ID: HRGMv2_1981_1_271
Type: TC
Location: 264519 - 265640 (+)
Gene ID: HRGMv2_1981_1_272
Type: CAZyme
Location: 265663 - 267717 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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