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Cluster: HRGMv2_1981_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1981_2 HRGMv2_1981_2_445 441729 442841 - 3.A.1.105.15
TC HRGMv2_1981_2 HRGMv2_1981_2_446 442838 443947 - 3.A.1.105.15
TC HRGMv2_1981_2 HRGMv2_1981_2_447 443944 445428 - 3.A.1.105.15
TC HRGMv2_1981_2 HRGMv2_1981_2_448 445430 446272 - 3.A.1.105.15
pfam HRGMv2_1981_2 HRGMv2_1981_2_449 446269 447585 - OEP | OEP
STP HRGMv2_1981_2 HRGMv2_1981_2_450 447578 448204 - TetR_N
CAZyme HRGMv2_1981_2 HRGMv2_1981_2_451 448273 451989 - GT5
Gene ID: HRGMv2_1981_2_445
Type: TC
Location: 441729 - 442841 (-)
Gene ID: HRGMv2_1981_2_446
Type: TC
Location: 442838 - 443947 (-)
Gene ID: HRGMv2_1981_2_447
Type: TC
Location: 443944 - 445428 (-)
Gene ID: HRGMv2_1981_2_448
Type: TC
Location: 445430 - 446272 (-)
Gene ID: HRGMv2_1981_2_449
Type: pfam
Location: 446269 - 447585 (-)
Gene ID: HRGMv2_1981_2_450
Type: STP
Location: 447578 - 448204 (-)
Gene ID: HRGMv2_1981_2_451
Type: CAZyme
Location: 448273 - 451989 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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