Cluster: HRGMv2_1977_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1977
- CGC Family ID: CGCFAM_01218
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1977_1 | HRGMv2_1977_1_335 | 348328 | 349410 | - | 3.A.6.2.1 |
| STP | HRGMv2_1977_1 | HRGMv2_1977_1_336 | 349443 | 350723 | - | EPSP_synthase |
| NULL(UNKNOWN) | HRGMv2_1977_1 | HRGMv2_1977_1_337 | 350723 | 351100 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_1977_1 | HRGMv2_1977_1_338 | 351206 | 352567 | + | GT2 |
Gene ID: HRGMv2_1977_1_335
Type: TC
Location: 348328 - 349410 (-)
Type: TC
Location: 348328 - 349410 (-)
Gene ID: HRGMv2_1977_1_336
Type: STP
Location: 349443 - 350723 (-)
Type: STP
Location: 349443 - 350723 (-)
Gene ID: HRGMv2_1977_1_337
Type:
Location: 350723 - 351100 (-)
Type:
Location: 350723 - 351100 (-)
Gene ID: HRGMv2_1977_1_338
Type: CAZyme
Location: 351206 - 352567 (+)
Type: CAZyme
Location: 351206 - 352567 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
UMGS1585
Species
UMGS1585 sp900766355
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.