Cluster: HRGMv2_1974_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1974
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1974_2 | HRGMv2_1974_2_341 | 354116 | 354724 | - | 9.B.31.1.2 |
| STP | HRGMv2_1974_2 | HRGMv2_1974_2_342 | 354804 | 357047 | + | TPR_1 | TPR_1 |
| pfam | HRGMv2_1974_2 | HRGMv2_1974_2_343 | 357040 | 357648 | + | Methyltransf_4 | GidB | TehB | Methyltransf_11 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | HRGMv2_1974_2 | HRGMv2_1974_2_344 | 357629 | 358870 | - | GT30 |
Gene ID: HRGMv2_1974_2_341
Type: TC
Location: 354116 - 354724 (-)
Type: TC
Location: 354116 - 354724 (-)
Gene ID: HRGMv2_1974_2_342
Type: STP
Location: 354804 - 357047 (+)
Type: STP
Location: 354804 - 357047 (+)
Gene ID: HRGMv2_1974_2_343
Type: pfam
Location: 357040 - 357648 (+)
Type: pfam
Location: 357040 - 357648 (+)
Gene ID: HRGMv2_1974_2_344
Type: CAZyme
Location: 357629 - 358870 (-)
Type: CAZyme
Location: 357629 - 358870 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp002102975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1974_2_341 | vegetarian > vegan | 1.49545 | 0.02398 |
| HRGMv2_1974_2_342 | vegetarian > vegan | 1.25344 | 0.02398 |
| HRGMv2_1974_2_344 | vegetarian > vegan | 1.26767 | 0.02398 |