Cluster: HRGMv2_1974_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1974
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1974_1 | HRGMv2_1974_1_81 | 75001 | 75615 | + | GH23 |
| STP | HRGMv2_1974_1 | HRGMv2_1974_1_82 | 75654 | 76598 | - | Glucokinase |
| NULL(UNKNOWN) | HRGMv2_1974_1 | HRGMv2_1974_1_83 | 76695 | 76892 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1974_1 | HRGMv2_1974_1_84 | 77151 | 77489 | + | 2.A.7.34.4 |
Gene ID: HRGMv2_1974_1_81
Type: CAZyme
Location: 75001 - 75615 (+)
Type: CAZyme
Location: 75001 - 75615 (+)
Gene ID: HRGMv2_1974_1_82
Type: STP
Location: 75654 - 76598 (-)
Type: STP
Location: 75654 - 76598 (-)
Gene ID: HRGMv2_1974_1_83
Type:
Location: 76695 - 76892 (-)
Type:
Location: 76695 - 76892 (-)
Gene ID: HRGMv2_1974_1_84
Type: TC
Location: 77151 - 77489 (+)
Type: TC
Location: 77151 - 77489 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp002102975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1974_1_81 | vegetarian > vegan | 1.76532 | 0.02398 |
| HRGMv2_1974_1_82 | vegetarian > vegan | 2.21021 | 0.02398 |
| HRGMv2_1974_1_83 | vegetarian > vegan | 19.91339 | 0.01644 |