Cluster: HRGMv2_1974_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1974
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1974_13 | HRGMv2_1974_13_8 | 9828 | 12095 | + | GH13_10 |
| NULL(UNKNOWN) | HRGMv2_1974_13 | HRGMv2_1974_13_9 | 12331 | 13557 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_1974_13 | HRGMv2_1974_13_10 | 13546 | 14943 | - | B12-binding |
| TC | HRGMv2_1974_13 | HRGMv2_1974_13_11 | 14936 | 16309 | - | 2.A.2.6.3 |
Gene ID: HRGMv2_1974_13_8
Type: CAZyme
Location: 9828 - 12095 (+)
Type: CAZyme
Location: 9828 - 12095 (+)
Gene ID: HRGMv2_1974_13_9
Type:
Location: 12331 - 13557 (+)
Type:
Location: 12331 - 13557 (+)
Gene ID: HRGMv2_1974_13_10
Type: STP
Location: 13546 - 14943 (-)
Type: STP
Location: 13546 - 14943 (-)
Gene ID: HRGMv2_1974_13_11
Type: TC
Location: 14936 - 16309 (-)
Type: TC
Location: 14936 - 16309 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Cyanobacteriota
Class
Vampirovibrionia
Order
Gastranaerophilales
Family
Gastranaerophilaceae
Genus
CAG-196
Species
CAG-196 sp002102975
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1974_13_8 | vegetarian > vegan | 1.24224 | 0.02398 |