Cluster: HRGMv2_1974_CGC14

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1974_6	HRGMv2_1974_6_42	55924	57432	-	GT2
pfam	HRGMv2_1974_6	HRGMv2_1974_6_43	57702	58232	-	Flavodoxin_2 \| FMN_red
TC	HRGMv2_1974_6	HRGMv2_1974_6_44	58296	59405	-	3.A.1.105.15
TC	HRGMv2_1974_6	HRGMv2_1974_6_45	59402	60511	-	3.A.1.105.15
TC	HRGMv2_1974_6	HRGMv2_1974_6_46	60508	61989	-	3.A.1.105.15
TC	HRGMv2_1974_6	HRGMv2_1974_6_47	61976	62836	-	3.A.1.105.15
TC	HRGMv2_1974_6	HRGMv2_1974_6_48	62833	64149	-	2.A.6.2.44

Gene ID: HRGMv2_1974_6_42
Type: CAZyme
Location: 55924 - 57432 (-)

Gene ID: HRGMv2_1974_6_43
Type: pfam
Location: 57702 - 58232 (-)

Gene ID: HRGMv2_1974_6_44
Type: TC
Location: 58296 - 59405 (-)

Gene ID: HRGMv2_1974_6_45
Type: TC
Location: 59402 - 60511 (-)

Gene ID: HRGMv2_1974_6_46
Type: TC
Location: 60508 - 61989 (-)

Gene ID: HRGMv2_1974_6_47
Type: TC
Location: 61976 - 62836 (-)

Gene ID: HRGMv2_1974_6_48
Type: TC
Location: 62833 - 64149 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_1974_6_42	vegetarian > vegan	1.45792	0.02398
HRGMv2_1974_6_45	vegetarian > vegan	1.27464	0.02398
HRGMv2_1974_6_46	vegetarian > vegan	1.10254	0.02398
HRGMv2_1974_6_48	vegetarian > vegan	1.21138	0.02398