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Cluster: HRGMv2_1971_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1971_3 HRGMv2_1971_3_230 243435 246527 + 2.A.6.1.17
TC HRGMv2_1971_3 HRGMv2_1971_3_231 246514 247701 + 2.A.6.1.5
NULL(UNKNOWN) HRGMv2_1971_3 HRGMv2_1971_3_232 247851 249317 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1971_3 HRGMv2_1971_3_233 249322 249663 - 2.A.7.34.4
NULL(UNKNOWN) HRGMv2_1971_3 HRGMv2_1971_3_234 250251 250655 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_1971_3 HRGMv2_1971_3_235 250664 251629 - TPR_1 | TPR_1
CAZyme HRGMv2_1971_3 HRGMv2_1971_3_236 252003 254045 + GH13_16
NULL(UNKNOWN) HRGMv2_1971_3 HRGMv2_1971_3_237 254140 254760 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1971_3 HRGMv2_1971_3_238 254762 255382 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_1971_3 HRGMv2_1971_3_239 255383 256357 - GT8
Gene ID: HRGMv2_1971_3_230
Type: TC
Location: 243435 - 246527 (+)
Gene ID: HRGMv2_1971_3_231
Type: TC
Location: 246514 - 247701 (+)
Gene ID: HRGMv2_1971_3_232
Type:
Location: 247851 - 249317 (+)
Gene ID: HRGMv2_1971_3_233
Type: TC
Location: 249322 - 249663 (-)
Gene ID: HRGMv2_1971_3_234
Type:
Location: 250251 - 250655 (+)
Gene ID: HRGMv2_1971_3_235
Type: STP
Location: 250664 - 251629 (-)
Gene ID: HRGMv2_1971_3_236
Type: CAZyme
Location: 252003 - 254045 (+)
Gene ID: HRGMv2_1971_3_237
Type:
Location: 254140 - 254760 (+)
Gene ID: HRGMv2_1971_3_238
Type:
Location: 254762 - 255382 (+)
Gene ID: HRGMv2_1971_3_239
Type: CAZyme
Location: 255383 - 256357 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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