Cluster: HRGMv2_1966_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1966
- CGC Family ID: CGCFAM_00029
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1966_98 | HRGMv2_1966_98_2 | 504 | 1283 | - | GT2 |
| pfam | HRGMv2_1966_98 | HRGMv2_1966_98_3 | 1512 | 2723 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | HRGMv2_1966_98 | HRGMv2_1966_98_4 | 2743 | 3330 | - | 9.B.18.1.2 |
| TC | HRGMv2_1966_98 | HRGMv2_1966_98_5 | 3334 | 5145 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_1966_98_2
Type: CAZyme
Location: 504 - 1283 (-)
Type: CAZyme
Location: 504 - 1283 (-)
Gene ID: HRGMv2_1966_98_3
Type: pfam
Location: 1512 - 2723 (-)
Type: pfam
Location: 1512 - 2723 (-)
Gene ID: HRGMv2_1966_98_4
Type: TC
Location: 2743 - 3330 (-)
Type: TC
Location: 2743 - 3330 (-)
Gene ID: HRGMv2_1966_98_5
Type: TC
Location: 3334 - 5145 (-)
Type: TC
Location: 3334 - 5145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium
Species
Fusobacterium sp000235465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.