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Cluster: HRGMv2_1966_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1966_39 HRGMv2_1966_39_6 6339 7046 + GH73
pfam HRGMv2_1966_39 HRGMv2_1966_39_7 7140 7589 + Acetyltransf_1 | FR47 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
TC HRGMv2_1966_39 HRGMv2_1966_39_8 8125 9558 + 2.A.21.2.3
pfam HRGMv2_1966_39 HRGMv2_1966_39_9 9642 11393 + MORN_2 | MORN_2 | MORN_2 | MORN_2 | YARHG
pfam HRGMv2_1966_39 HRGMv2_1966_39_10 11496 11858 + Glutaredoxin | ArsC
TC HRGMv2_1966_39 HRGMv2_1966_39_11 11883 13157 + 2.A.26.1.5
pfam HRGMv2_1966_39 HRGMv2_1966_39_12 13199 14407 + tRNA-synt_1b | SYY_C-terminal
pfam HRGMv2_1966_39 HRGMv2_1966_39_13 14604 16388 + ShlB | POTRA_2 | POTRA_3
TC HRGMv2_1966_39 HRGMv2_1966_39_14 16403 22192 + 1.C.75.1.2
Gene ID: HRGMv2_1966_39_6
Type: CAZyme
Location: 6339 - 7046 (+)
Gene ID: HRGMv2_1966_39_7
Type: pfam
Location: 7140 - 7589 (+)
Gene ID: HRGMv2_1966_39_8
Type: TC
Location: 8125 - 9558 (+)
Gene ID: HRGMv2_1966_39_9
Type: pfam
Location: 9642 - 11393 (+)
Gene ID: HRGMv2_1966_39_10
Type: pfam
Location: 11496 - 11858 (+)
Gene ID: HRGMv2_1966_39_11
Type: TC
Location: 11883 - 13157 (+)
Gene ID: HRGMv2_1966_39_12
Type: pfam
Location: 13199 - 14407 (+)
Gene ID: HRGMv2_1966_39_13
Type: pfam
Location: 14604 - 16388 (+)
Gene ID: HRGMv2_1966_39_14
Type: TC
Location: 16403 - 22192 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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