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Cluster: HRGMv2_1962_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1962_2 HRGMv2_1962_2_245 273593 274684 - 3.A.1.1.6
pfam HRGMv2_1962_2 HRGMv2_1962_2_246 274790 275275 - PgpA
CAZyme HRGMv2_1962_2 HRGMv2_1962_2_247 275272 276567 - GH165
TC HRGMv2_1962_2 HRGMv2_1962_2_248 276545 278413 - 3.A.1.5.11
TC HRGMv2_1962_2 HRGMv2_1962_2_249 278415 279251 - 3.A.1.5.20
TC HRGMv2_1962_2 HRGMv2_1962_2_250 279261 280199 - 3.A.1.5.20
TC HRGMv2_1962_2 HRGMv2_1962_2_251 280196 281782 - 3.A.1.5.28
Gene ID: HRGMv2_1962_2_245
Type: TC
Location: 273593 - 274684 (-)
Gene ID: HRGMv2_1962_2_246
Type: pfam
Location: 274790 - 275275 (-)
Gene ID: HRGMv2_1962_2_247
Type: CAZyme
Location: 275272 - 276567 (-)
Gene ID: HRGMv2_1962_2_248
Type: TC
Location: 276545 - 278413 (-)
Gene ID: HRGMv2_1962_2_249
Type: TC
Location: 278415 - 279251 (-)
Gene ID: HRGMv2_1962_2_250
Type: TC
Location: 279261 - 280199 (-)
Gene ID: HRGMv2_1962_2_251
Type: TC
Location: 280196 - 281782 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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