Cluster: HRGMv2_1962_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1962
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1962_2 | HRGMv2_1962_2_229 | 256428 | 257480 | - | GT28 |
| TC | HRGMv2_1962_2 | HRGMv2_1962_2_230 | 257477 | 258580 | - | 2.A.103.1.3 |
| pfam | HRGMv2_1962_2 | HRGMv2_1962_2_231 | 258573 | 259823 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_1962_2 | HRGMv2_1962_2_232 | 259835 | 260923 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_1962_2_229
Type: CAZyme
Location: 256428 - 257480 (-)
Type: CAZyme
Location: 256428 - 257480 (-)
Gene ID: HRGMv2_1962_2_230
Type: TC
Location: 257477 - 258580 (-)
Type: TC
Location: 257477 - 258580 (-)
Gene ID: HRGMv2_1962_2_231
Type: pfam
Location: 258573 - 259823 (-)
Type: pfam
Location: 258573 - 259823 (-)
Gene ID: HRGMv2_1962_2_232
Type: TC
Location: 259835 - 260923 (-)
Type: TC
Location: 259835 - 260923 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Leptotrichiaceae
Genus
Sneathia
Species
Sneathia sanguinegens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.