Cluster: HRGMv2_1951_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1951
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1951_99 | HRGMv2_1951_99_2 | 732 | 1421 | - | 3.A.1.125.1 |
| TC | HRGMv2_1951_99 | HRGMv2_1951_99_3 | 1414 | 2577 | - | 3.A.1.125.5 |
| CAZyme | HRGMv2_1951_99 | HRGMv2_1951_99_4 | 2579 | 4855 | - | GT51 |
| peptidase | HRGMv2_1951_99 | HRGMv2_1951_99_5 | 4855 | 9711 | - | I39.UPW |
| TC | HRGMv2_1951_99 | HRGMv2_1951_99_6 | 9730 | 11646 | - | 2.A.16.2.2 |
Gene ID: HRGMv2_1951_99_2
Type: TC
Location: 732 - 1421 (-)
Type: TC
Location: 732 - 1421 (-)
Gene ID: HRGMv2_1951_99_3
Type: TC
Location: 1414 - 2577 (-)
Type: TC
Location: 1414 - 2577 (-)
Gene ID: HRGMv2_1951_99_4
Type: CAZyme
Location: 2579 - 4855 (-)
Type: CAZyme
Location: 2579 - 4855 (-)
Gene ID: HRGMv2_1951_99_5
Type: peptidase
Location: 4855 - 9711 (-)
Type: peptidase
Location: 4855 - 9711 (-)
Gene ID: HRGMv2_1951_99_6
Type: TC
Location: 9730 - 11646 (-)
Type: TC
Location: 9730 - 11646 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.