Cluster: HRGMv2_1951_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1951
- CGC Family ID: CGCFAM_09914
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1951_91 | HRGMv2_1951_91_2 | 838 | 1845 | + | 3.A.1.24.2 |
| TC | HRGMv2_1951_91 | HRGMv2_1951_91_3 | 1835 | 2482 | + | 3.A.1.24.5 |
| TC | HRGMv2_1951_91 | HRGMv2_1951_91_4 | 2515 | 3297 | + | 3.A.1.24.5 |
| TC | HRGMv2_1951_91 | HRGMv2_1951_91_5 | 3331 | 4098 | + | 3.A.1.24.5 |
| CAZyme | HRGMv2_1951_91 | HRGMv2_1951_91_6 | 4303 | 5646 | + | GH4 |
| TC | HRGMv2_1951_91 | HRGMv2_1951_91_7 | 5666 | 7225 | + | 4.A.1.1.13 |
Gene ID: HRGMv2_1951_91_2
Type: TC
Location: 838 - 1845 (+)
Type: TC
Location: 838 - 1845 (+)
Gene ID: HRGMv2_1951_91_3
Type: TC
Location: 1835 - 2482 (+)
Type: TC
Location: 1835 - 2482 (+)
Gene ID: HRGMv2_1951_91_4
Type: TC
Location: 2515 - 3297 (+)
Type: TC
Location: 2515 - 3297 (+)
Gene ID: HRGMv2_1951_91_5
Type: TC
Location: 3331 - 4098 (+)
Type: TC
Location: 3331 - 4098 (+)
Gene ID: HRGMv2_1951_91_6
Type: CAZyme
Location: 4303 - 5646 (+)
Type: CAZyme
Location: 4303 - 5646 (+)
Gene ID: HRGMv2_1951_91_7
Type: TC
Location: 5666 - 7225 (+)
Type: TC
Location: 5666 - 7225 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.