Cluster: HRGMv2_1951_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1951
- CGC Family ID: CGCFAM_02780
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1951_53 | HRGMv2_1951_53_2 | 1797 | 3422 | - | 3.A.1.121.4 |
| pfam | HRGMv2_1951_53 | HRGMv2_1951_53_3 | 3636 | 4595 | + | Oxidored_FMN | Oxidored_FMN |
| CAZyme | HRGMv2_1951_53 | HRGMv2_1951_53_4 | 4576 | 5079 | + | GT104 |
| CAZyme | HRGMv2_1951_53 | HRGMv2_1951_53_5 | 5174 | 5686 | + | GT104 |
Gene ID: HRGMv2_1951_53_2
Type: TC
Location: 1797 - 3422 (-)
Type: TC
Location: 1797 - 3422 (-)
Gene ID: HRGMv2_1951_53_3
Type: pfam
Location: 3636 - 4595 (+)
Type: pfam
Location: 3636 - 4595 (+)
Gene ID: HRGMv2_1951_53_4
Type: CAZyme
Location: 4576 - 5079 (+)
Type: CAZyme
Location: 4576 - 5079 (+)
Gene ID: HRGMv2_1951_53_5
Type: CAZyme
Location: 5174 - 5686 (+)
Type: CAZyme
Location: 5174 - 5686 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Fusobacteriota
Class
Fusobacteriia
Order
Fusobacteriales
Family
Fusobacteriaceae
Genus
Fusobacterium_A
Species
Fusobacterium_A varium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.